also which fan gets plugged in will affect how they show up in the bios
usually your main system fan (the socket you have) goes to the cpu cooler fan and will show up as cpu fan in the bios or any system spec software.

HP Media Center machine
MOBO: ASUS OEM board
CPU: 2.6 GHz Socket AM2 Athlon X2 5000+
RAM: 2 GB Qimonda PC2-4200 DDR2 RAM
GFX: Sapphire Radeon HD 4850
HDD: Seagate Barracuda 320 GB SATA 7200 RPM